Dev tools · alternatives · 2026
24 alternatives to Franklin an open source DNA sequence annotation tool
Below are 24 products that do a similar job, ranked by how close each is in meaning and then by launch-day votes. Franklin an open source DNA sequence annotation tool launched in 2016; newer entries below may have overtaken it.
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Google's AI map of every possible human DNA mutation
Sep 2026 · blog.google · its alternatives →
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- 4WA
Online DNA and Protein Sequence Tools, Alignments, Reverse complement, Translation, Sequence annotation, design Primers
2017 · genewarrior.com · its alternatives →
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A simple R package which helps with annotation of single cell experiments such as single cell RNA-seq. With up and down regulated genes per cell cluster, the local LLM guesses the cell type annotation and creates an overall extensive report.
2024 · github.com · its alternatives →
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Scientific collaboration for Next-Generation Sequencing
2015 · precision.fda.gov · its alternatives →
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OpenScience▲75The open-source AI workbench for scientific research
26d ago · openscience.sh · its alternatives →
- 11IG
2014 · helix.io · its alternatives →
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Loci▲60Open-source biomedical image analysis for every lab
Sep 2026 · github.com · its alternatives →
- 13NE
continuous, objective and reproducible evaluation of genome assemblers using docker containers
2014 · nucleotid.es · its alternatives →
- 14HI
2014 · demo.helix.io · its alternatives →
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Dec 2025 · plus-rkwitt.github.io · its alternatives →
- 16

An efficient OpenFST-based tool for calculating WER and aligning two transcript sequences. - revdotcom/fstalign
2021 · github.com · its alternatives →
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2023 · github.com · its alternatives →
- 19DM
2018 · dataturks.com · its alternatives →
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Reproducing the paper "Kernel-Based Approaches for Sequence Modeling: Connections to Neural Methods" - palakg11/KASM-Pytorch
2019 · github.com · its alternatives →
- 21DA
2013 · drillbitapp.com · its alternatives →
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A lightweight vanilla Javascript micro-library for making collapsible trees with JSON - MaxLeiter/jsonTree
2016 · github.com · its alternatives →
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:ribbon: A data mining suite for gene expression data. - HelikarLab/candis
2017 · github.com · its alternatives →
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Ranked by how close each launch is in meaning, then by votes. Prices were read from each product’s own site when checked and can change. Refine with your own description →